The Road to Ethical Science: A Guide to Restoring Trust in Science

Edition: 1

Copyright: 2023

Pages: 241

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Rarely a week goes by without reading about a case of unethical behavior during the conduct of research. By the time the misconduct is discovered, the damage is often done. Such unethical behavior leads to a loss of trust in the scientific enterprise and, nowadays, also to increased polarization in the philosophical and political views of our society.

What drives individuals and organizations to engage in research misconduct and other unethical behavior that undermines the integrity of and trust in the scientific enterprise? How can we guard against unethical behavior? One major reason is that there does not exist a sufficient emphasis on the relationship between ethics and trust in the context of our scientific enterprise for people to realize that much more is at stake when the prospect of short-term gains drives unethical behavior.

The information in The Road to Ethical Science: A Guide to Restoring Trust in Science serves as a roadmap for both current and future scientists as well as the lay public in how to frame scientific decisions in ethically appropriate ways. This book gives the reader a comprehensive understanding of how to become a successful ethical scientist, learn the reasons for unethical behavior in science and life more generally, and how to avoid the pitfalls that can lead to unethical behavior.

This book covers many examples of unethical behavior in the conduct of science, how those ethical lapses affected regulatory and compliance oversight of science, and how individuals can guard against ethical failures in the performance of science. Substantial discussion on the reasons for distrust in science, including the lack of reproducibility and replicability, toxic lab environments irresponsible publishing, confirmation bias, and the role of social media in the spread of scientific (mis)information as well as ways to cultivate more trust in the scientific process are presented. Considerable coverage of ethical issues in the areas of artificial intelligence, biotechnology, hyperconnectivity, and new energy technologies, how these will transform our lives in the future, and the ethical implications that they present, is also included.

Preface 
Introduction 

CHAPTER 1 WHY ETHICS FOR SCIENCE AND ENGINEERING 
How Science Works 
     Knowledge Discovery and the Role of Evidence 
Ethical Philosophies 
     Normative Ethics 
     Secular Ethics 
     Anticipatory Technology Ethics 
Ethics Education 

CHAPTER 2 TRUST 
Drivers of Distrust in Science 
     Sloppy Science: Reproducibility and Replicability 
     Toxic Science: Intimidation in the Lab 
     Fake Science: Disinformation and Misinformation 
     Splashy Science: Overstating Claims 
     Open Science: Responsible Publishing 
     Biased Science: Confirmation Bias 
Cultivating Trust in Science 
     Communicating Research 
     Regulating Research 
     Managing Risk 

CHAPTER 3 THE DEVELOPMENT AND ROLE OF RESEARCH UNIVERSITIES 
The Global Scholarly Community and Our Debt to the Past 
     Developments in Eurasia until the 5th Century 
     Islamic Empires between the 6th and 11th Century 
The Institutionalization of Research 
     The Rise of Universities in Western Europe between the 11th and 17th Century 
The Rise of Government Control 
     Higher Education in Western Europe in the 18th and 19th Centuries 
     Germany 
     France 
     Britain 
A Brief History of Funding for Knowledge Generation 
Ethical Implications of the Complexity of Knowledge Generation 

CHAPTER 4 THE EVOLUTION OF RESEARCH UNIVERSITIES IN THE UNITED STATES 
The Early Years 
The Rise of the Research University in the 19th Century 
Increasing Influence of the Federal Government 
The Rise of Applied Research 
Research in the United States in the 1950s and 1960s 
     The Response to Sputnik 
R&D Funding 
     Economic, Political, and Social Factors Determine Federal R&D Funding 
     Main Performers and Funders of R&D 
     Basic and Applied Research and Development 
     R&D Funding in Higher Education 
     Federal Funding Priorities 
The Research University in the 21st Century 
Challenges Ahead 

CHAPTER 5 THE PRIVATE SECTOR
The Four Industrial Revolutions 
Commercialization and the Bayh-Dole Act 
     Commercialization 
     Start-Up Companies and Universities 
     Academia–Industry Partnerships 
When Industry-Funded Research Compromises Objectivity and Independence 
     Influencing Research Agendas: The Center for Indoor Air Research 
     Manipulating Evidence: GlaxoSmithKline’s Diabetes Drug Rosiglitazone 
     Suppressing Publications: A Drug to Treat Thalassemia 
     Undue Influence: Uber 
     The Need for Academia–Industry Partnerships 
Big Science 
     Military–Industrial Complex 
     Big Pharma 
          The Opioid Crisis 
          Raising Drug Prices: EpiPens and Daraprim 
          When Regulatory Oversight Works 
     Big Tech 
Philanthropic Support of Research 

CHAPTER 6 RESEARCH TRENDS IN THE 21ST CENTURY 
Broadening the Scope of Research 
     A Shift to Interdisciplinary Research 
     A Greater Focus on Solving Societal Problems 
          The National Science Foundation Pushes Team Science and Broader Impact 
          How to Make Team Science Work 
     Commercialization of University Research 
Measuring the Impact of Research 
     Measuring the Impact of Academic and Private Sector Investments 
          U.S. World and News Report Metric 
               Carnegie Classification 
               STAR METRICS 
               Higher Education Institutions 
     An International Example: United Kingdom 
Measuring the Impact on Society 
     Altmetrics 
     Clinical Research 
     Public Health 
Increasing Research Impact 

CHAPTER 7 SCIENCE AND SOCIETY 
Science in the Crosshairs 
     COVID-19 
     Climate Change 
     The Theory of Evolution 
Lobbying, Grassroot Movements, and Public Impact 
     Gun Violence 
     HIV/AIDS 
Globalization and National Security 
     Export Controls 
     Impact on the US Research Enterprise

CHAPTER 8 RESEARCH INTEGRITY 
Research Misconduct 
     Fabrication, Falsification, and Plagiarism 
     Case Study: Stem Cells 
Responsible Conduct of Research (RCR) 
     Case Study: Tuskegee 
Conflict of Interest and Conflict of Commitment 
     Financial Conflicts of Interest (fCOIs) in Public–Private Partnerships 
     Managing COIs/fCOIs/COCs 
     Gifts to Academic Clinical Researchers and Physicians 
     Case Study: Harvard Medical School—A Financial Conflict of Interest 
     Rebuttable Presumption 
Oversight of Human Subject and Animal Research 
     Case Studies: Adverse Outcomes in Human Subjects Experiments 
     Institutional Review Boards (IRBs) 
          The Belmont Report 
     Clinical Trials 
     The Use of Animals in Research 
Why Does Research Misconduct Still Occur? 

CHAPTER 9 BECOMING A RESEARCHER 
Creating a Positive Research Environment 
     Seeking Mentors 
     The Importance of Networking 
     Professional Societies 
     Going to Conferences 
The Toxic Lab 
     Reporting Abusive or Unethical Behavior and Retaliation 
The Research Process 
     Seeking Funding: General Remarks 
     Writing an NIH Proposal 
     Data Management 
          Data Management Plan and Good Data Management Practices 
          Data Ownership 
          Community-Based Research 
     Case Studies 
          Bioprospecting 
          Henrietta Lacks 
          Ancient DNA 
     Authorship and Peer Review 
          Authorship 
          Peer Review 
Concluding Remarks 
     Lack of Accountability and Integrity Erodes Trust 
     Understanding Academic Medical Centers: Simone’s Maxims 

CHAPTER 10 FUTURE CHALLENGES
Artificial Intelligence (AI) 
     Natural Language Processing 
          The Need for Data 
          The Need for Fair Algorithms 
     Machines Competing with Human Qualities 
          Creativity 
          Generative AI 
          Sentience 
Hyperconnectivity 
     Surveillance 
     Data Privacy 
     Cybersecurity 
     Virtual Environments 
Biotechnology 
     Brain–Computer Interfaces 
     Genetic Manipulation 
          CRISPR—A Gene Editing Tool 
          Gene Drive 
     Designing Pathogens 
          Gain-of-Function Research 
          Therapeutic Agents 
New Energy Technologies 
     Energy Transition and the Global Community 
Having a Voice 
Global Ethics: Solving Societal Problems 
Enhancing Ethical Practices 
Denouement 

About the Authors

Brian Herman

Dr. Brian Herman has spent the past 40 years teaching, doing research, and serving as the administrator in charge of research at Harvard Medical School, The University of North Carolina Chapel Hill (UNC-CH), the University of Texas (UT), and the University of Minnesota (UMN). Dr. Herman has also served as Vice President for Research at UT Health in San Antonio, Texas, and at UMN. As a senior research administrator, Dr. Herman worked at the US national level to develop conflict of interest/financial conflict of interest policies that have been adopted by US universities to make sure that research done by colleges and universities is free from inappropriate influences. Additionally, Dr. Herman has spent many years examining and developing policies surrounding treating and including human participants in clinical research trials. These focused on the ethical issues surrounding the recruitment of mentally ill patients into trials following involuntary commitment, whether physicians should recruit their own patients in research trials they are performing, whistleblower protections that allow employees to report unethical behavior without retribution, and institutional culture as it relates to moral, ethical choices. Presently, Dr. Herman is a Full Professor of Biomedical Engineering at UMN as well as CEO of Herman, Neuhauser Research Management Consulting, Inc. (www.hnrmctx.com), which advises institutions and corporations on strategy/organizational/operational aspects, regulatory and compliance needs, and management of data of all kinds across the data lifecycle. Dr. Herman’s research has focused on the areas of aging and cell death. His work has led to new insights into the disease process of osteoporosis, neurodegeneration (Alzheimer’s Disease), and cancer. Because of his research contributions, he has been awarded multiple honors, including being listed in the American Men and Women of Science, American Cancer Society Faculty Research Award, Presidential Distinguished Senior Scholar Award, Who’s Who in American Education, Dozer Fellowship from Ben Gurion University, Israel and two 10-year Method to Extend Research in Time (MERIT) Award, awarded by the National Institutes of Health to the top 1-2% scientists in the US.

Claudia Neuhauser

Claudia Neuhauser, PhD, is Associate Vice President/Associate Vice Chancellor for Research at the University of Houston (UH) and currently serves as Interim Vice President/Vice Chancellor for Research. In addition, she is Professor of Mathematics at UH, serves as the Director of the Hewlett Packard Enterprise Data Science Institute at UH, and is VP at Herman, Neuhauser Research Management Consulting, Inc. (www.hnrmctx.com). Prior to coming to the University of Houston in 2018, she served as Associate Vice President for Research and Director of Research Computing at the University of Minnesota. In her capacity as Director of Research Computing, she directed the University of Minnesota Informatics Institute, the Minnesota Supercomputing Institute, and U Spatial.  She was the founding Director of Graduate Studies of the Biomedical Informatics and Computational Biology graduate program at the University of Minnesota from 2008 to 2017 and served as Vice Chancellor for Academic Affairs at the newly established University of Minnesota Rochester from 2008 and 2013. Neuhauser’s research is at the interface of mathematics and biology. She received her Diplom in mathematics from the Universität Heidelberg (Germany) in 1988 and a Ph.D. in mathematics from Cornell University in 1990. She is a Howard Hughes Medical Institute Professor, a fellow of the American Association for the Advancement of Science (AAAS), and a fellow of the American Mathematical Society (AMS). Neuhauser’s research is at the interface of mathematics and biology and focuses on the development of statistical methods in biomedical applications. Her interest in furthering the quantitative training of life science undergraduate students has resulted in a widely used calculus book (Calculus for Biology and Medicine), which is now in its fourth edition.

Rarely a week goes by without reading about a case of unethical behavior during the conduct of research. By the time the misconduct is discovered, the damage is often done. Such unethical behavior leads to a loss of trust in the scientific enterprise and, nowadays, also to increased polarization in the philosophical and political views of our society.

What drives individuals and organizations to engage in research misconduct and other unethical behavior that undermines the integrity of and trust in the scientific enterprise? How can we guard against unethical behavior? One major reason is that there does not exist a sufficient emphasis on the relationship between ethics and trust in the context of our scientific enterprise for people to realize that much more is at stake when the prospect of short-term gains drives unethical behavior.

The information in The Road to Ethical Science: A Guide to Restoring Trust in Science serves as a roadmap for both current and future scientists as well as the lay public in how to frame scientific decisions in ethically appropriate ways. This book gives the reader a comprehensive understanding of how to become a successful ethical scientist, learn the reasons for unethical behavior in science and life more generally, and how to avoid the pitfalls that can lead to unethical behavior.

This book covers many examples of unethical behavior in the conduct of science, how those ethical lapses affected regulatory and compliance oversight of science, and how individuals can guard against ethical failures in the performance of science. Substantial discussion on the reasons for distrust in science, including the lack of reproducibility and replicability, toxic lab environments irresponsible publishing, confirmation bias, and the role of social media in the spread of scientific (mis)information as well as ways to cultivate more trust in the scientific process are presented. Considerable coverage of ethical issues in the areas of artificial intelligence, biotechnology, hyperconnectivity, and new energy technologies, how these will transform our lives in the future, and the ethical implications that they present, is also included.

Preface 
Introduction 

CHAPTER 1 WHY ETHICS FOR SCIENCE AND ENGINEERING 
How Science Works 
     Knowledge Discovery and the Role of Evidence 
Ethical Philosophies 
     Normative Ethics 
     Secular Ethics 
     Anticipatory Technology Ethics 
Ethics Education 

CHAPTER 2 TRUST 
Drivers of Distrust in Science 
     Sloppy Science: Reproducibility and Replicability 
     Toxic Science: Intimidation in the Lab 
     Fake Science: Disinformation and Misinformation 
     Splashy Science: Overstating Claims 
     Open Science: Responsible Publishing 
     Biased Science: Confirmation Bias 
Cultivating Trust in Science 
     Communicating Research 
     Regulating Research 
     Managing Risk 

CHAPTER 3 THE DEVELOPMENT AND ROLE OF RESEARCH UNIVERSITIES 
The Global Scholarly Community and Our Debt to the Past 
     Developments in Eurasia until the 5th Century 
     Islamic Empires between the 6th and 11th Century 
The Institutionalization of Research 
     The Rise of Universities in Western Europe between the 11th and 17th Century 
The Rise of Government Control 
     Higher Education in Western Europe in the 18th and 19th Centuries 
     Germany 
     France 
     Britain 
A Brief History of Funding for Knowledge Generation 
Ethical Implications of the Complexity of Knowledge Generation 

CHAPTER 4 THE EVOLUTION OF RESEARCH UNIVERSITIES IN THE UNITED STATES 
The Early Years 
The Rise of the Research University in the 19th Century 
Increasing Influence of the Federal Government 
The Rise of Applied Research 
Research in the United States in the 1950s and 1960s 
     The Response to Sputnik 
R&D Funding 
     Economic, Political, and Social Factors Determine Federal R&D Funding 
     Main Performers and Funders of R&D 
     Basic and Applied Research and Development 
     R&D Funding in Higher Education 
     Federal Funding Priorities 
The Research University in the 21st Century 
Challenges Ahead 

CHAPTER 5 THE PRIVATE SECTOR
The Four Industrial Revolutions 
Commercialization and the Bayh-Dole Act 
     Commercialization 
     Start-Up Companies and Universities 
     Academia–Industry Partnerships 
When Industry-Funded Research Compromises Objectivity and Independence 
     Influencing Research Agendas: The Center for Indoor Air Research 
     Manipulating Evidence: GlaxoSmithKline’s Diabetes Drug Rosiglitazone 
     Suppressing Publications: A Drug to Treat Thalassemia 
     Undue Influence: Uber 
     The Need for Academia–Industry Partnerships 
Big Science 
     Military–Industrial Complex 
     Big Pharma 
          The Opioid Crisis 
          Raising Drug Prices: EpiPens and Daraprim 
          When Regulatory Oversight Works 
     Big Tech 
Philanthropic Support of Research 

CHAPTER 6 RESEARCH TRENDS IN THE 21ST CENTURY 
Broadening the Scope of Research 
     A Shift to Interdisciplinary Research 
     A Greater Focus on Solving Societal Problems 
          The National Science Foundation Pushes Team Science and Broader Impact 
          How to Make Team Science Work 
     Commercialization of University Research 
Measuring the Impact of Research 
     Measuring the Impact of Academic and Private Sector Investments 
          U.S. World and News Report Metric 
               Carnegie Classification 
               STAR METRICS 
               Higher Education Institutions 
     An International Example: United Kingdom 
Measuring the Impact on Society 
     Altmetrics 
     Clinical Research 
     Public Health 
Increasing Research Impact 

CHAPTER 7 SCIENCE AND SOCIETY 
Science in the Crosshairs 
     COVID-19 
     Climate Change 
     The Theory of Evolution 
Lobbying, Grassroot Movements, and Public Impact 
     Gun Violence 
     HIV/AIDS 
Globalization and National Security 
     Export Controls 
     Impact on the US Research Enterprise

CHAPTER 8 RESEARCH INTEGRITY 
Research Misconduct 
     Fabrication, Falsification, and Plagiarism 
     Case Study: Stem Cells 
Responsible Conduct of Research (RCR) 
     Case Study: Tuskegee 
Conflict of Interest and Conflict of Commitment 
     Financial Conflicts of Interest (fCOIs) in Public–Private Partnerships 
     Managing COIs/fCOIs/COCs 
     Gifts to Academic Clinical Researchers and Physicians 
     Case Study: Harvard Medical School—A Financial Conflict of Interest 
     Rebuttable Presumption 
Oversight of Human Subject and Animal Research 
     Case Studies: Adverse Outcomes in Human Subjects Experiments 
     Institutional Review Boards (IRBs) 
          The Belmont Report 
     Clinical Trials 
     The Use of Animals in Research 
Why Does Research Misconduct Still Occur? 

CHAPTER 9 BECOMING A RESEARCHER 
Creating a Positive Research Environment 
     Seeking Mentors 
     The Importance of Networking 
     Professional Societies 
     Going to Conferences 
The Toxic Lab 
     Reporting Abusive or Unethical Behavior and Retaliation 
The Research Process 
     Seeking Funding: General Remarks 
     Writing an NIH Proposal 
     Data Management 
          Data Management Plan and Good Data Management Practices 
          Data Ownership 
          Community-Based Research 
     Case Studies 
          Bioprospecting 
          Henrietta Lacks 
          Ancient DNA 
     Authorship and Peer Review 
          Authorship 
          Peer Review 
Concluding Remarks 
     Lack of Accountability and Integrity Erodes Trust 
     Understanding Academic Medical Centers: Simone’s Maxims 

CHAPTER 10 FUTURE CHALLENGES
Artificial Intelligence (AI) 
     Natural Language Processing 
          The Need for Data 
          The Need for Fair Algorithms 
     Machines Competing with Human Qualities 
          Creativity 
          Generative AI 
          Sentience 
Hyperconnectivity 
     Surveillance 
     Data Privacy 
     Cybersecurity 
     Virtual Environments 
Biotechnology 
     Brain–Computer Interfaces 
     Genetic Manipulation 
          CRISPR—A Gene Editing Tool 
          Gene Drive 
     Designing Pathogens 
          Gain-of-Function Research 
          Therapeutic Agents 
New Energy Technologies 
     Energy Transition and the Global Community 
Having a Voice 
Global Ethics: Solving Societal Problems 
Enhancing Ethical Practices 
Denouement 

About the Authors

Brian Herman

Dr. Brian Herman has spent the past 40 years teaching, doing research, and serving as the administrator in charge of research at Harvard Medical School, The University of North Carolina Chapel Hill (UNC-CH), the University of Texas (UT), and the University of Minnesota (UMN). Dr. Herman has also served as Vice President for Research at UT Health in San Antonio, Texas, and at UMN. As a senior research administrator, Dr. Herman worked at the US national level to develop conflict of interest/financial conflict of interest policies that have been adopted by US universities to make sure that research done by colleges and universities is free from inappropriate influences. Additionally, Dr. Herman has spent many years examining and developing policies surrounding treating and including human participants in clinical research trials. These focused on the ethical issues surrounding the recruitment of mentally ill patients into trials following involuntary commitment, whether physicians should recruit their own patients in research trials they are performing, whistleblower protections that allow employees to report unethical behavior without retribution, and institutional culture as it relates to moral, ethical choices. Presently, Dr. Herman is a Full Professor of Biomedical Engineering at UMN as well as CEO of Herman, Neuhauser Research Management Consulting, Inc. (www.hnrmctx.com), which advises institutions and corporations on strategy/organizational/operational aspects, regulatory and compliance needs, and management of data of all kinds across the data lifecycle. Dr. Herman’s research has focused on the areas of aging and cell death. His work has led to new insights into the disease process of osteoporosis, neurodegeneration (Alzheimer’s Disease), and cancer. Because of his research contributions, he has been awarded multiple honors, including being listed in the American Men and Women of Science, American Cancer Society Faculty Research Award, Presidential Distinguished Senior Scholar Award, Who’s Who in American Education, Dozer Fellowship from Ben Gurion University, Israel and two 10-year Method to Extend Research in Time (MERIT) Award, awarded by the National Institutes of Health to the top 1-2% scientists in the US.

Claudia Neuhauser

Claudia Neuhauser, PhD, is Associate Vice President/Associate Vice Chancellor for Research at the University of Houston (UH) and currently serves as Interim Vice President/Vice Chancellor for Research. In addition, she is Professor of Mathematics at UH, serves as the Director of the Hewlett Packard Enterprise Data Science Institute at UH, and is VP at Herman, Neuhauser Research Management Consulting, Inc. (www.hnrmctx.com). Prior to coming to the University of Houston in 2018, she served as Associate Vice President for Research and Director of Research Computing at the University of Minnesota. In her capacity as Director of Research Computing, she directed the University of Minnesota Informatics Institute, the Minnesota Supercomputing Institute, and U Spatial.  She was the founding Director of Graduate Studies of the Biomedical Informatics and Computational Biology graduate program at the University of Minnesota from 2008 to 2017 and served as Vice Chancellor for Academic Affairs at the newly established University of Minnesota Rochester from 2008 and 2013. Neuhauser’s research is at the interface of mathematics and biology. She received her Diplom in mathematics from the Universität Heidelberg (Germany) in 1988 and a Ph.D. in mathematics from Cornell University in 1990. She is a Howard Hughes Medical Institute Professor, a fellow of the American Association for the Advancement of Science (AAAS), and a fellow of the American Mathematical Society (AMS). Neuhauser’s research is at the interface of mathematics and biology and focuses on the development of statistical methods in biomedical applications. Her interest in furthering the quantitative training of life science undergraduate students has resulted in a widely used calculus book (Calculus for Biology and Medicine), which is now in its fourth edition.